Modernizing HPC Cluster Monitoring

By Nicole Hemsoth

September 18, 2014

If you thought cluster management tools were too plentiful to count, they have nothing on system monitoring. From open source to commercial packages, the list goes on. The problem, however, is that there are too few tools that bring together a unified view of what’s happening on large clusters in a comprehensive way—from gathering data from the scheduler, the compute, and the applications themselves.

Although there are no hard numbers on its use, Ganglia appears to be the clear leader in terms of cluster monitoring. According to X-ISS President and CEO, around 90% of HPC shops of all sizes are using the framework, with another small subset using other mature HPC monitoring tools like Supermon. His company has seen its share of large and mid-sized HPC clusters in their decade-plus run in the systems business, but what they haven’t been able to find until more recently are ways to get a “single pane of glass” view into how the clusters are operating holistically. In other words, there has been no capability to take the strengths of Ganglia and similar tooling and mesh that capability with a wealth of other cluster monitoring and management data.

To be fair, modernization and sophistication of tools like Ganglia has been happening at a quick clip, especially since the “wider world” is catching on to the value of these tools. Not to single out Ganglia (since there are other apt examples), but its usage is surging beyond the halls of HPC. Cloud service providers, hyperscale datacenter operators, and a new crop of big data types are picking it out of a crowd. (On this note, for the love of god, do not type “Ganglia growth” into Google. It is not what you’re looking for. Ew.)

While the existing cadre of monitoring tools are perfect for understanding the nuts and bolts of what’s happening with a cluster from a hardware and general performance perspective, Khosla says that they are unable to provide a more comprehensive view into other practical metrics, including those around broader application and project performance, job cost, and historical trends. Even when coupled with the analytics tools found in all of the popular schedulers, including LSF, Torque, PBS and others, users are left with a scattered field of results that are technical to chew through quickly and too distributed to mesh without significant effort.

This problem is compounded by centers that have distributed HPC datacenters. For example, in the oil and gas industry, which was the impetus for X-ISS to build a broader view, clusters are scattered in different geographical areas, often with varied scheduler and system environments. Pulling together a single-pane view of these systems and their efficiency on an operational, application, cost, and performance level is not a simple task and involves that troublesome meshing of different tools.

For these users, pushing together the data is not the only practical challenge. “HPC users are by nature wary about anything that gets put into their stack,” says Khosla. “This means they aren’t going to want to add more monitoring or other tools when they’ve been using something like Ganglia and their regular scheduler tools.” So if this is the case—and the need for more comprehensive, meshed monitoring is clear—what are users to do?

The solution is to hook into existing monitoring and other tools and their collectors and feed all of that data into one place. In the case of X-ISS and its cluster analytics, the data is fed via a secure tunnel into their own servers where it is processed for a real-time or historical/trends view for analysis via a web portal. This way, there’s no need for users to add more weight to their monitoring operations or to create a performance drag on the systems with the addition of yet another tool to manage.

XISS_internal

The analytics and monitoring tool X-ISS cooked up, called DecisionHPC, hooks into most of the common schedulers used in HPC environments (Torque, PBS Pro, LSF, CJM, and Grid Engine) and can snap in with Ganglia and other custom monitoring tools.

Users can access the web interface to view several aspects about the overall operation of the cluster, then refine the analysis to look at things from new vantage points, including cost analysis, performance details to help gauge and refine what is failing or working well, and of course the know-how to adjust to overcome or complement the findings.

An example of the dashboard is below, but what’s notable here, says Kholsa, is how it offers a real-time view of what’s happening with the cluster(s) at any given moment. It’s possible to monitor clusters in different geographic locations, even those running different schedulers, monitoring agents, with variable hardware configuration—another unique element, he argues.

XISS_internal2

He agrees that it is indeed possible to do all of these things with existing tools, but they’re all separate and can only provide part of the insight. For instance, he says, “what’s available in Linux tools are system-level metrics, but most HPC users don’t make use of those tools because you have to go to the node level. Other tools like Ganglia give you a more manageable view but it’s technical and has to be done piece by piece, making it hard to get a global view.” He added that while it’s possible to see what’s happening with the CPU, memory, I/O, and other elements, “it can’t answer questions like how busy a cluster was application-wise from month to month, for instance.”As it stands now, many are just writing their own tools for reporting, which also doesn’t offer the level of ease and insight needed.

“Today we have our largest customer with about 15k objects we’re monitoring and around 20-30 metrics every 5 minutes—and at any moment they can pull up a live view of those 7000. The analytics tools in schedulers can’t report live like this. Part of the goal is application profiling and benchmarking also but also, CPU, memory, network throughput alone are valuable.”

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industry updates delivered to you every week!

Anders Dam Jensen on HPC Sovereignty, Sustainability, and JU Progress

April 23, 2024

The recent 2024 EuroHPC Summit meeting took place in Antwerp, with attendance substantially up since 2023 to 750 participants. HPCwire asked Intersect360 Research senior analyst Steve Conway, who closely tracks HPC, AI, Read more…

AI Saves the Planet this Earth Day

April 22, 2024

Earth Day was originally conceived as a day of reflection. Our planet’s life-sustaining properties are unlike any other celestial body that we’ve observed, and this day of contemplation is meant to provide all of us Read more…

Intel Announces Hala Point – World’s Largest Neuromorphic System for Sustainable AI

April 22, 2024

As we find ourselves on the brink of a technological revolution, the need for efficient and sustainable computing solutions has never been more critical.  A computer system that can mimic the way humans process and s Read more…

Empowering High-Performance Computing for Artificial Intelligence

April 19, 2024

Artificial intelligence (AI) presents some of the most challenging demands in information technology, especially concerning computing power and data movement. As a result of these challenges, high-performance computing Read more…

Kathy Yelick on Post-Exascale Challenges

April 18, 2024

With the exascale era underway, the HPC community is already turning its attention to zettascale computing, the next of the 1,000-fold performance leaps that have occurred about once a decade. With this in mind, the ISC Read more…

2024 Winter Classic: Texas Two Step

April 18, 2024

Texas Tech University. Their middle name is ‘tech’, so it’s no surprise that they’ve been fielding not one, but two teams in the last three Winter Classic cluster competitions. Their teams, dubbed Matador and Red Read more…

Anders Dam Jensen on HPC Sovereignty, Sustainability, and JU Progress

April 23, 2024

The recent 2024 EuroHPC Summit meeting took place in Antwerp, with attendance substantially up since 2023 to 750 participants. HPCwire asked Intersect360 Resear Read more…

AI Saves the Planet this Earth Day

April 22, 2024

Earth Day was originally conceived as a day of reflection. Our planet’s life-sustaining properties are unlike any other celestial body that we’ve observed, Read more…

Kathy Yelick on Post-Exascale Challenges

April 18, 2024

With the exascale era underway, the HPC community is already turning its attention to zettascale computing, the next of the 1,000-fold performance leaps that ha Read more…

Software Specialist Horizon Quantum to Build First-of-a-Kind Hardware Testbed

April 18, 2024

Horizon Quantum Computing, a Singapore-based quantum software start-up, announced today it would build its own testbed of quantum computers, starting with use o Read more…

MLCommons Launches New AI Safety Benchmark Initiative

April 16, 2024

MLCommons, organizer of the popular MLPerf benchmarking exercises (training and inference), is starting a new effort to benchmark AI Safety, one of the most pre Read more…

Exciting Updates From Stanford HAI’s Seventh Annual AI Index Report

April 15, 2024

As the AI revolution marches on, it is vital to continually reassess how this technology is reshaping our world. To that end, researchers at Stanford’s Instit Read more…

Intel’s Vision Advantage: Chips Are Available Off-the-Shelf

April 11, 2024

The chip market is facing a crisis: chip development is now concentrated in the hands of the few. A confluence of events this week reminded us how few chips Read more…

The VC View: Quantonation’s Deep Dive into Funding Quantum Start-ups

April 11, 2024

Yesterday Quantonation — which promotes itself as a one-of-a-kind venture capital (VC) company specializing in quantum science and deep physics  — announce Read more…

Nvidia H100: Are 550,000 GPUs Enough for This Year?

August 17, 2023

The GPU Squeeze continues to place a premium on Nvidia H100 GPUs. In a recent Financial Times article, Nvidia reports that it expects to ship 550,000 of its lat Read more…

Synopsys Eats Ansys: Does HPC Get Indigestion?

February 8, 2024

Recently, it was announced that Synopsys is buying HPC tool developer Ansys. Started in Pittsburgh, Pa., in 1970 as Swanson Analysis Systems, Inc. (SASI) by John Swanson (and eventually renamed), Ansys serves the CAE (Computer Aided Engineering)/multiphysics engineering simulation market. Read more…

Intel’s Server and PC Chip Development Will Blur After 2025

January 15, 2024

Intel's dealing with much more than chip rivals breathing down its neck; it is simultaneously integrating a bevy of new technologies such as chiplets, artificia Read more…

Choosing the Right GPU for LLM Inference and Training

December 11, 2023

Accelerating the training and inference processes of deep learning models is crucial for unleashing their true potential and NVIDIA GPUs have emerged as a game- Read more…

Comparing NVIDIA A100 and NVIDIA L40S: Which GPU is Ideal for AI and Graphics-Intensive Workloads?

October 30, 2023

With long lead times for the NVIDIA H100 and A100 GPUs, many organizations are looking at the new NVIDIA L40S GPU, which it’s a new GPU optimized for AI and g Read more…

Baidu Exits Quantum, Closely Following Alibaba’s Earlier Move

January 5, 2024

Reuters reported this week that Baidu, China’s giant e-commerce and services provider, is exiting the quantum computing development arena. Reuters reported � Read more…

Shutterstock 1179408610

Google Addresses the Mysteries of Its Hypercomputer 

December 28, 2023

When Google launched its Hypercomputer earlier this month (December 2023), the first reaction was, "Say what?" It turns out that the Hypercomputer is Google's t Read more…

AMD MI3000A

How AMD May Get Across the CUDA Moat

October 5, 2023

When discussing GenAI, the term "GPU" almost always enters the conversation and the topic often moves toward performance and access. Interestingly, the word "GPU" is assumed to mean "Nvidia" products. (As an aside, the popular Nvidia hardware used in GenAI are not technically... Read more…

Leading Solution Providers

Contributors

Shutterstock 1606064203

Meta’s Zuckerberg Puts Its AI Future in the Hands of 600,000 GPUs

January 25, 2024

In under two minutes, Meta's CEO, Mark Zuckerberg, laid out the company's AI plans, which included a plan to build an artificial intelligence system with the eq Read more…

China Is All In on a RISC-V Future

January 8, 2024

The state of RISC-V in China was discussed in a recent report released by the Jamestown Foundation, a Washington, D.C.-based think tank. The report, entitled "E Read more…

Shutterstock 1285747942

AMD’s Horsepower-packed MI300X GPU Beats Nvidia’s Upcoming H200

December 7, 2023

AMD and Nvidia are locked in an AI performance battle – much like the gaming GPU performance clash the companies have waged for decades. AMD has claimed it Read more…

Nvidia’s New Blackwell GPU Can Train AI Models with Trillions of Parameters

March 18, 2024

Nvidia's latest and fastest GPU, codenamed Blackwell, is here and will underpin the company's AI plans this year. The chip offers performance improvements from Read more…

Eyes on the Quantum Prize – D-Wave Says its Time is Now

January 30, 2024

Early quantum computing pioneer D-Wave again asserted – that at least for D-Wave – the commercial quantum era has begun. Speaking at its first in-person Ana Read more…

GenAI Having Major Impact on Data Culture, Survey Says

February 21, 2024

While 2023 was the year of GenAI, the adoption rates for GenAI did not match expectations. Most organizations are continuing to invest in GenAI but are yet to Read more…

The GenAI Datacenter Squeeze Is Here

February 1, 2024

The immediate effect of the GenAI GPU Squeeze was to reduce availability, either direct purchase or cloud access, increase cost, and push demand through the roof. A secondary issue has been developing over the last several years. Even though your organization secured several racks... Read more…

Intel’s Xeon General Manager Talks about Server Chips 

January 2, 2024

Intel is talking data-center growth and is done digging graves for its dead enterprise products, including GPUs, storage, and networking products, which fell to Read more…

  • arrow
  • Click Here for More Headlines
  • arrow
HPCwire